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User Support Analysis Group
… computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment …
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Marine Microbe Contains Multitudes
… ecologically distinct groups with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab), through the JGI Community Science Program . The metagenomes were also …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in … encoded in the genome sequence is part of the integrative science mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human … and Administration departments. He previously served as JGI’s Business Manager from 2007 to 2012, overseeing all … Deputy of Operations provides oversight and leadership of JGI operations infrastructure, including space and …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 years ago, the  Genomes OnLine … other DOE-funded projects — the National Microbiome Data Collaborative ( NMDC ) and the DOE Systems Biology …
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An Addiction Crucial to a Fungus’ Reproduction
… regulate key components of its reproductive machinery The Science To better understand how beneficial organisms … Rhizopus microsporus (Rm) and Burkholderia endobacteria, a collaborative effort led by researchers at Cornell … and experimented with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC …
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VEGA Symposium
… JGI Organizers … Jasmine Bunn , JGI Administrative Support …
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Approved Proposals
… proposals from previous fiscal years for our Community Science Program (CSP) as well as the Facilities Integrating Collaborations for User Science (FICUS) program.  …
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Busting the Unbreakable Lignin
… fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in Berkeley.  Organizing this workshop, too, was collaborative. Bruce Hungate and Egbert Schwartz of Northern …
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