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When “The Blob” Made It Hotter Under the Water
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … nutrient flux in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral …
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Depth distributions of nitrite reductase (nirK) gene variants reveal spatial dynamics of thaumarchaeal ecotype populations in coastal Monterey Bay
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Frederik Schulz
… and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the … . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. …
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Building Sphagnum Genomic Resources
… carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … acidic and waterlogged environments, occupying every continent except Antarctica. Researchers estimate a … stored in peatlands, which make up nearly 3 percent of the earth’s land surface. In the New Phytologist, researchers …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the way to seed but prevent the seeds from falling,” said JGI Plant Program head Jeremy Schmutz , who is also a … mapping back to identify candidate genes.”  Through the JGI’s Community Science Program , sequences of several …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling the frontiers of … In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries … of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant community of postdoctoral and …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … I was not sure we could even complete a full project. Every other group I contacted was happy to offer advice but …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … Nayfach A, et al. 2021. A genomic catalogue of Earth’s microbiomes. Biotechnol . doi: … inoviruses are pervasive in bacteria and archaea across Earth’s biomes. Nature Microbiol. 4: 1895-1906. Roux S, et …
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Partners
The JGI leverages its existing partnerships and develops others … advance the science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha … and RNA extractions to support plant and other efforts. The JGI works closely with DOE computational facilities (e.g., …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… incredibly useful for understanding the microbiome of the earth, but most species do not grow easily in the lab. To … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … their analysis goals. Offering this tool establishes the JGI as a leader in single-cell genomic amplification at a …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their …
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Metabolomics
Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles … analysis.   Overview of metabolomics products At JGI, in-depth molecular profiles are generated for …
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