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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Fungus Fuels Tree Growth
… not well understood — scientists can better fine-tune their engineering efforts of both plants and root microbiomes to grow energy crops more efficiently. Summary To interrogate the close partnership of … how to optimize characteristics like growth rate. Harnessing that power could help usher widespread use of …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… and participation — is especially important in microbial ecosystems. These communities harbor tens of thousands of … microbes cycle nitrogen and carbon, or how freshwater ecosystems process methane and organic matter.  However, to get … Especially as machine learning and AI promise new ways of harnessing large datasets, JGI researchers and users are …
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Open Frameworks Training the Next Generation of Scientists
… (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase (KBase). The JGI and KBase are … applications in a range of fields including agriculture, ecosystem health, and medicine optimization.  Through the … developmental support from KBase (The Department of Energy Systems Biology Knowledgebase). Myco-Ed is supported by the …
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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Engineering a Synthetic Escherichia coli Coculture for Compartmentalized de novo Biosynthesis of Isobutyl Butyrate from Mixed Sugars
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JGI at the AGU Fall Meeting
… a single research proposal: Maximize Your Research by Harnessing Multiple Scientific User Facilities in One … Data Standards and Reproducible Workflows To Advance Earth System Science” 11:18am Convention Center, Rm 238-239: Kaela …
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Busting the Unbreakable Lignin
… the entire landscape of biomass production and bioproduct engineering. Summary That organisms make use of cellulose … presumed. After all, they’re able to produce enzymes highly efficient at making use of those other two components, which …
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FICUS-NERSC/KBASE
… performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological …
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John Vogel
… In addition to this fundamental work, he established an efficient switchgrass transformation pipeline and, in …
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Webinar: PhycoCosm Tutorial
… model with PhycoCosm, how do we go about getting it in your system? A: I think the best way is to contact us for … as we want to support you in getting these data on our system. If it’s not based on the gene model, that should be … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Nick Everson
… Institute and the Operations Deputy for LBNL’s Biological Systems & Engineering Division. Prior to his tenure with Berkeley Lab, …
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