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Emiley Eloe-Fadrosh
… joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research … University of Maryland School of Medicine and her graduate work in microbial oceanography at Scripps Institution of … Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to …
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JGI Launches Latest Strategic Plan
Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide … JGI advisory committees and its primary funders at the DOE Office of Biological and Environmental Research (BER), …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, … has been that. That person needs establish the culture of workforce safety and diversity and working together and … before the event segued to remarks by the leadership of the DOE Office of Biological and Environmental Research: …
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Game On: High School Students Drive Everglades Metagenomics Study
Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science … but it also took a very motivated teacher willing to work and learn in a discipline without the expertise, along … partnership. The class decided to do an environmental microbial community (metagenomic) soil study in an untouched …
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Forming Scientific Connections and Building Community
… experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … In just two months, the students participated in networking workshops, data carpentry hackathons, and also made … W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded Microbial Genomes ” Morgan Lavenstein Bendall : “It’s great …
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When “The Blob” Made It Hotter Under the Water
… event may foreshadow climate change impact on marine microbial communities. The Science A team of researchers … samples were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … . The proposal focuses on uncovering the metabolic networks involved in carbon and nutrient flux in marine …
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Ken Chu
… and maintenance of analytical tools and user interface components for the IMG family of systems. …
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The Power of One, Amplified
… a single low diversity hot spring sediment sample. Their work showed that single cell genomics can add significant … of bioinformatics tools for  extracting snippets of microbial genomes directly from environmental sequence data, … University of Calgary and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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A One-Stop Shop for Analyzing Algal Genomes
… data scientist Alan Kuo at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for microbial and metagenome datasets, …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities than ever before — especially with the … AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these … in proposal calls to the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … organisms share space at cellular scale: fungi stretch a network of tendrils called arbuscules into a plant’s root … is a research scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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