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Kjiersten Fagnan
… Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research Division. As a postdoc, her research focused … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about how the JGI …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related to her thesis on cone …
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Refining the Process of Identifying Algae Biotechnology Candidates
… -- copy to summary above^ as well ] The Science The recipe for growing algae as a source of sustainable biofuels seems fairly simple: place these algae in a container with access to sunlight, water and carbon dioxide … NL0032266. This work was also completed in part by the National Renewable Energy Laboratory, operated by Alliance for …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. … through responsibly managing our people and resources.   Director's Perspective   Honors & Awards …
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The fungus that made itself at home
… new ecological habitat. The Science By comparing genetic information from similar organisms, researchers have gained insights … down plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how … Agricultural Sciences and FORMAS, and the UK Natural Environment Research Council. The work conducted by the U.S. …
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JGIota: Looking Back at Sequencing for Soybeans
… The soybean is a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the soybean, Glycine max. With a full genome sequence, … have been able to look into soybean’s strengths – along with a fungus that threatens this important crop. Hear …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have … successfully automated aspects of a commonly-used process for studying microbial communities, with results published … materials can be broken down for things like biomass and  biofuels . However, AMF and the microbial communities they …
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2022 Progress Report
… from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint … capabilities in support of the DOE’s research mission.     Director's Perspective     Honors & Awards …
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Ben Bowen
… spectrometry-centered projects, Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and … for advanced analysis, modeling, and data integration. Dr. Bowen’s expertise in spectral alignment, molecular … Arkansas, Fayetteville, Chemical Engineering Ph. D. – Arizona State University, Tempe, Chemical Engineering …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … in early fungi and discovered genes that are critical for this process. The Impact In the absence of the … This research was supported by the National Science Foundation and the National Institutes of …
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