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New and Improved: Eucalyptus Reference is Now Accessible
… genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances … using advanced technologies to reconstruct the complete sequences of individual chromosomes. The team describes the … understand the genetic structural diversity of the genus. Understanding all the gene variants and how they interact …
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Genome‐wide mapping of cytosine methylation revealed dynamic DNA methylation patterns associated with genes and centromeres in rice
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Fine Mapping of the Bsr1 Barley Stripe Mosaic Virus Resistance Gene in the Model Grass Brachypodium distachyon
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Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication
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A Sorghum Pangenome Opens More Doors to Discovery
… development, dozens of reference genomes and thousands of resequenced sorghum varieties, a resource for breeders and … eventually offers avenues for translating its strengths into other crops for biofuels and bioproducts. Historically, … a single reference genome shows only one slice of the adaptation possible for this plant. In other lines around the …
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Dan Rokhsar
… and led the computational efforts directed towards the sequencing, annotation, and analysis of three human … evolutionary biology. Dr. Rokhsar’s research is focused on understanding the origin, evolution, and diversity of plants … feedstocks and understanding and ultimately assisting the adaptation of plants to changing environments. …
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Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes.
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… of its kind ever assembled. The team identified 15 core genes shared across all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over evolutionary time. They also discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… community able to not just analyze but also create DNA sequences mimicking an array of microbial life. By … Imagine you’re at an arcade and need to convert your money into tokens to play the various machines. You’d go find the … collected across various terrains, and microbial life adapted to extreme conditions studied through the Antarctic …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can affect how microbes cycle nutrients and adapt to climate change. …
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In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes
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Polar Phytoplankton Need Zinc to Cope with the Cold
… and nutrients. These microscopic algae have managed to adapt to a unique set of conditions in polar waters, … extremely important for polar phytoplankton.  After peering into the function and activity of phytoplankton genes and … collaboration, in 2017, they published the first genome sequence of a cold-adapted microalga: the diatom …
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