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Nigel Mouncey
… and Biotechnology Diversity Committee Member (2015-2016), Society for Industrial Microbiology and … Fermentation process. (2008) U.S. Patent Application US7344855 … catalog of Earth’s microbiomes. Nat Biotechnol. 39:499-509 Hurley A et al. 2021. Tiny Earth: A Big Idea for STEM …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … completed by the JGI. It has since been cited more than 5,400 times, including a number of projects that point to … due to the sequence’s availability via Phytozome. In 2015,  a new and revised version brought the soybean sequence …
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Learning to Look
… more than 10,000 inovirus-like sequences compared to the 56 previously known inovirus genomes. “These genomes are so … approach detected inoviruses in 3,609 (6 percent) of the 56,868 microbial genomes and 2,249 of the 6,412 (35 percent) metagenomes mined for this study. “We’re simply …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and DEB-1542599 to M.O.). Support was also …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Taking a conservative approach, we were able to assemble ~75% of the Olpidium genome and retrieve ~300 markers for … these diversification events occurred approximately 650 million years ago, and that the first terrestrial fungi …
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An Automated Tool for Assessing Virus Data Quality
… on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both … the U.S. Department of Energy under contract no. DE-AC02-05CH11231. This work was also supported the grant …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her … were generated, though the final analyses focused on 598 individuals. Schmutz and his team assembled and … and assembled the green millet “pan-genome” (a set of 51,000 genes that represent all the genes that are present …
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Supercharging SIP in the Fungal Hyphosphere
… under the auspices of the U.S. DOE under Contract DE-AC52-07NA27344. The work conducted by the U.S. Department of … Department of Energy operated under Contract No. DE-AC02-05CH11231. …
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JGI-UC Merced Interns Share Their 2021 Experiences
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
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