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User Support Analysis Group
User Support Analysis group provides computational analysis for new technology development and JGI user science projects. We perform analysis for diverse experiment types, with main focus areas being …
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one …
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River microbiomes from around the world: Kelly Wrighton
Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the …
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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Characterization of the Clostridium thermocellum AdhE, NfnAB, ferredoxin and Pfor proteins for their ability to support high titer ethanol production in Thermoanaerobacterium saccharolyticum
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The INSIG2 rs7566605 genetic variant does not play a major role in obesity in a sample of 24,722 individuals from four cohorts
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Yasuo Yoshikuni
… of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … of citramalate., Metabolic Engineering Communications , 2023 Wu et al. Structural characterization of a soil viral … - a functional chitosanase., Nature Communications , 2023 Zhao and Yoshikuni, Discovering untapped biochemistry …
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Frederik Schulz
… discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel … of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna (Austria) … Krinos et al. … a temperate dimictic lake. Microbiome . Camargo A. et al. 2023. Identification of mobile genetic elements with …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… addition to the synthetic biologist’s toolkit: a technique for  c hassis (or strain)-independent  r ecombinase- a … “CRAGE is central to our ability to offer host-engineering for our users,” says JGI Director Nigel Mouncey. Using … cover of ACS Synthetic Biology. (Wayne Keefe/Berkeley Lab) For example, the JGI first used CRAGE to engineer …
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Draft genomes and assemblies of the ectomycorrhizal basidiomycetes Scleroderma citrinum hr and S. yunnanense jo associated with chestnut trees
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