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Boosting Small Molecule Production in Super “Soup”
… for maintenance to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by … and so one of the things that I think is so special about this collaboration is that we’re doing work in yeast, … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory.
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Picking Up Threads of Cotton Genomics
… of the five major lineages of cotton;  G. tomentosum ,  G. mustelinum , and  G. darwinii are the others. All of these … another study co-author at Texas A&M University. “This report establishes new opportunities in multiple basic and … is one such example.” Jones noted that he talks to growers about Cotton Inc.’s long-term investment in crop research. …
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Integrating Experimentation with Data
… $500     Students: $200      Postdocs: $250     Industry: $700    Thanks for joining the Joint Genome Institute … featured insightful presentations, dynamic panel discussions, informative poster sessions, thought-provoking … of Energy (DOE) Office of Science national scientific user facilities dedicated to advancing research in bioenergy …
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Frederik Schulz
… leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs … to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… which microbes are present in a sample, to generate data about which organisms are active, and which microbes are … microbial ecosystems. These communities harbor tens of thousands of different organisms who all consume different … along these lines, all with the goals of better data reporting, improved collaboration, and more comparable …
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You Can Move, But You Can’t Hide
… identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic … biogeochemical cycles around them. By understanding more about the genomics of MGEs and their evolution at the … annotation and classification framework that combines and builds on two standard techniques for identifying viruses …
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JGI on the 2021 Highly Cited Researchers List
… Nikos Kyrpides Dan Rokhsar Simon Roux Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, reported on over the last year: Jeremy Schmutz was part of a … (Watch SCGSR fellows Nick Reichart and Ian Rambo talk about their experiences at the JGI.) Igor Grigoriev hosted …
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Boosting Small Molecule Production in Super “Soup”
… for maintenance to keep processes running smoothly. As  reported August 26, 2021, in  Nature Communications , researchers led by … and so one of the things that I think is so special about this collaboration is that we’re doing work in yeast, … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
Learn more
Enlarging Windows into Understanding Gene Functions
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Leo Baumgart and Juna Lee developed two approaches that build upon the DAP-seq technology O’Malley developed. Unique … as tough as it has been 10 years ago,” he said. “We thought about reconstructing gene regulatory networks, understanding …
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Emiley Eloe-Fadrosh
… microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … genomic information from uncultivated microbes and viruses. Prior to joining the JGI, she was a Bioinformatics … Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and …
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A Model System for Perennial Grasses
… model to study drought tolerance in perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two … for developing methods for converting plant biomass into sustainable fuels for cars and jets. By studying a close … Institute (JGI), a DOE Office of Science User Facility, report the culmination of nearly a decade of work to develop …
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