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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through … Our research focuses on the assembly of metagenomic sequence data into …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… 2013 Nature paper , which uncovered nearly 30 major previously uncharted branches of the tree of life. A senior … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… to the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their … Biochemistry, Microbiology) Jeremy Schmutz (Cross-field) Susannah Tringe (Microbiology) Tanja Woyke (Biology and … Roux, along with data from a consortium that included Susannah Tringe and Tanja Woyke, were all instrumental in the …
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Axel Visel
… in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max … of vertebrate genomes, which led to the discovery of thousands of genetic switches implicated in developmental and …
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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Climate-smart crops with enhanced photosynthesis.
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  … v13. Below are some answers to Frequently Asked Questions about the transition from Phytozome v12 to v13. Why is it …
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Trent Northen
… leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using …
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Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics
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Sequencing crop genomes: approaches and applications
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An Integrated Dataset to Understand Ecosystem Interaction
… time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… and applying these engineered ecosystems across various biological contexts. The program fosters intimate, … EcoFAB 2025 Conference is organized by the EcoFAB Steering Committee, dedicated to advancing standardized fabricated …
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