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… look at more ecosystems and organisms than ever before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. Last year, the … which borders the University of Wisconsin-Madison, for over 20 years in order to better understand how the freshwater …

… Research of the U.S. Department of Energy grant DE-SC0020420 (MAO), Institute for Collaborative Biotechnologies … (MAO), US Army Research Office contract W911NF-19-1-0010 (MAO), National Science Foundation grant MCB-1553721 …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and … specific algae. The reference genome is cited in roughly 10% of all since-released publications on green algae. “The …

… biocontrol agents dramatically affect plant health. The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of Life, …

… modern sugarcane cultivars are hybrids, each with more than 100 chromosomes; assembling a sugarcane genome is incredibly complex given its estimated size of 10 billion bases (more than three times the size of the … in sorghum. Based in part on these positive results, in 2017, JGI approved a CSP proposal from the international …

… (in this case, a plant’s complete genetic makeup) and 10 common gardens. We discovered that 8X populations have …

… partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of sugarcane … The work (proposal: https://doi.org/10.46936/10.25585/60001084 and … of Energy (DOE) Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility and the …

… into DNA by active microbial populations (Hungate et al. 2015). With the development of high-throughput SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies (Hofmeyr et al. 2020) we are able to quantify isotope incorporation across a … microbiomes. mSystems0:e01744-24. https://doi.org/10.1128/msystems.01744-24 Oliver, T., Varghese, N., Roux, S. …

… Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly biased … through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood G. T., Teh K. H., … and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). …