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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a … Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To … approach: CRISPR-Cas9 relies on RNA with a short guiding sequence (20 bp) that directs the endonuclease where to cut, …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … of metagenome-assembled viral genomes . The Impact The microbes that play key roles in cycling nutrients such as …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria …
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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
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Uncovering Novel Genomes from Earth’s Microbiomes
… for multiple applications.       Despite advances in sequencing technologies and computational methods in the … small fraction of Earth’s microbial diversity. Because most microbes cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. Identifying and …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … to commandeer. For bacteriophage viruses, these hosts are microbes like bacteria, not humans. With metagenomic … kinds of ecosystems. However, matching these viral genetic sequences to their hosts is crucial to understanding what …
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Complete genome sequence of Halorhodospira halophila SL1
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Genome Project Standards in a New Era of Sequencing
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Reference genome sequence of the model plant Setaria
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Genome sequence of the model rice variety KitaakeX
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Sequencing of Genomes from Environmental Single Cells
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Genome sequence of the model mushroom Schizophyllum commune
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