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Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria
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Triphenyltin degradation and proteomic response by an engineered Escherichia coli expressing cytochrome P450 enzyme
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Tracing the Evolution of Shiitake Mushrooms
… the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the … mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the family tree for Lentinula. … Specifically, many species had very similar plant cell wall degrading enzymes (PCWDEs), including carbohydrate-active …
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Simulation of Deepwater Horizon oil plume reveals substrate specialization within a complex community of hydrocarbon degraders
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Leucoagaricus gongylophorus Produces Diverse Enzymes for the Degradation of Recalcitrant Plant Polymers in Leaf-Cutter Ant Fungus Gardens
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Genome and transcriptome analysis of the lignite-degrading Trichoderma cf. simile WF8 strain highlights potential degradation mechanisms
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Interactions among triphenyltin degradation, phospholipid synthesis and membrane characteristics of Bacillus thuringiensis in the presence of d-malic acid
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once … simiae  with fluorescent markers to visualize the bacterium colonizing plant roots — a proof-of-principle for …
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JGI-USCCN Strain Sequencing Opportunity
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global … Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … insights on crop improvements at a genetic level, including why having multiple copies of their genomes (polyploidy) is …
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Draft genome sequence of the Tremellomycetes yeast Papiliotrema laurentii 5307AH, isolated from aircraft
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the … harmful to plants and can efficiently colonize roots by degrading the plant cell wall component pectin. The results …
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