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Metagenomes and metatranscriptomes from boreal potential and actual acid sulfate soil materials
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the … producers fueling our planet’s biogeochemical cycles. Water samples from Ace Lake were collected over a 10-year period … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Gamete expression of TALE class HD genes activates the diploid sporophyte program in Marchantia polymorpha
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Improving Synthetic Biology Communication: Recommended Practices for Visual Depiction and Digital Submission of Genetic Designs
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … in terms of their natural products chemistry, and he has a project with the JGI to synthesize the genes for and explore … connected with a wonderful person who’s a Co-PI on a JGI project Amy Schaefer . So we’ve been friends ever since. …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… run away, they’ve evolved these really tough cell wall materials that keep microbes — and the enzymes that would be produced by microorganisms — out,” said JGI user/collaborator Michelle O’Malley, a chemical and … into biochemical production.    Over time, as these projects have delivered results, they have also snowballed …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… computing infrastructure and analysis. This way, JGI users — both primary, data-generating users, as well as … For example, with support from the  Exascale Computing Project , the JGI — along with the National Energy Research … at the JGI and Berkeley Lab were developing specific programs to handle this scale of data. Part 2: Souped Up …
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Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes
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Model Fern Reveals Insight into DNA Thievery in Ferns
… — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … is passed along to offspring supplying it with raw genetic materials and increased genome complexity, made sense. The …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture …
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Intrinsic and Extrinsic Programming of Product Chain Length and Release Mode in Fungal Collaborating Iterative Polyketide Synthases
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … engagement activities under the umbrella of the SOD Blitz Project. In hopes of controlling the spread of the disease, … lab in Mulford Hall. There, they conducted DNA analyses of samples collected on recent SOD Blitz expeditions. The team …
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