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Making a Lichen Together
… a lichen’s genomes and transcriptomes could help inform efforts at bioengineering symbiotic microbial … colleagues worked with Igor Grigoriev, the Fungal & Algal Program lead at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and his team at the JGI contributed …
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EcoFABs: advancing microbiome science through standardized fabricated ecosystems
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Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)
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Matthew Kellom
… microbial life and environment, and using metagenomics to study these complex natural systems. Microbial … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based …
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MicroSyn: A user friendly tool for detection of microsynteny in a gene family
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JGI announces final round of 2022 Functional Genomics awardees
… functional genomics research from potential users who need help translating genomic information into biological function. Through our CSP … is July 31. You can learn more about our Community Science Program here .  …
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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after … Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus at the … JGI Director Eddy Rubin. “QSB faculty are active DOE JGI Community Science Program collaborators, and UC Merced has …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks like a duck, so … in part by the  Facilities Integrating Collaborations for User Science (FICUS) collaborative science initiative …
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Integrating Experimentation with Data
… data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic panel discussions, informative poster sessions, thought-provoking flash talks, … by the DOE's Biological and Environmental Research (BER) program.   … About the Organizers … Stefani Ferreira , …
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A One-Stop Shop for Analyzing Algal Genomes
… genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are … and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan Kuo at … in the Nucleic Acids Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal …
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Marine Microbe Contains Multitudes
… the metabolisms that SAR324 and other microbes use could inform scientists’ understanding of carbon fluxes in the … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (Berkeley Lab), through the JGI Community Science Program . The metagenomes were also processed using the …
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