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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … that live there.  Researchers from Portland State University and the University of Wisconsin-Madison collected … at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome …
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … students (and their mentors) how to begin establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … there a tool in this platform to search fungal genomes in metagenomes? A: Search in metagenomes is available from another JGI portal, IMG:  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion … We encourage you to read through it, provide us feedback and to help us calibrate progress toward our near- …
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Improving the Cacao Genome and Phytozome
… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating with others to develop healthier … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Georg Rath
… Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at NERSC, IMBA (Institute of Molecular Biotechnology, Vienna) and the High Field MRI Centre in Vienna, where he first stumbled from software development into building productive infrastructure …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … A collaborative team led by Joey Spatafora at Oregon State University, Jason Stajich at the University of California, … data were generated, bioinformatic tools for binning metagenome data involved with mainly eukaryotic origins were …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and … Source Capabilities for FICUS Program” Sabeeha Merchant , University of California, Berkeley: “Cu economy and luxury …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of the Earth’s carbon as well as material that can be … sphagnum  genomes from plants selected by a team from Duke University, then tested for heat and pH stress by Oak Ridge …
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Three Join the JGI User Executive Committee
… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … National Laboratory and Elizabeth “Lizzy” Wilbanks of the University of California, Santa Barbara. They join eight … and the JGI-EMSL FICUS programs and brings expertise in metagenomics and novel applications for long-read DNA …
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When “The Blob” Made It Hotter Under the Water
… impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … The Blob reached southern California. Steven Hallam of the University of British Columbia was already collecting ocean … a former postdoctoral fellow in the Hallam lab now at the University of Southern Denmark, and colleagues at Hakai …
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