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Extreme dimensions — how big (or small) can tailed phages be?
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Thousands of small, novel genes predicted in global phage genomes
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Natural Prodcast Episode 22: Alison Narayan
… nature does this with such elegance And also to take advantage of the biological properties that these molecules have … to test that hypothesis through site-directed mutagenesis, we would end up with dead enzymes. So often, when … So I would say we run enzymatic reactions anywhere from 4 degrees to room temperature, to slightly elevated. We …
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Bacterial Genome Annotation
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A bacterial toolkit for plants
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Training the Next Generation of Talent
… with postdoctoral fellow Ben Cole on a project involving bacteria in Arabidopsis plant roots. At the same time, … chemotaxis in the Arabidopsis microbiome, particularly, how bacteria can be driven toward compounds produced by the … which is best for the task at hand. “There are at least 30-40 programs and it is not clear which are the best to use,” …
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Global overview and major challenges of host prediction methods for uncultivated phages
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Identification of over ten thousand candidate structured RNAs in viruses and phages
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… to find beautiful diversity.”  Within that diversity of bacteria and fungi, O’Malley and her team are amassing all … genomics and transcriptomics to discover another advantage these fungi wield: the capacity to form enzyme …
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How to Target a Microbial Needle within a Community Haystack
… of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … allow researchers to focus on specific microbes within metagenome samples and associate their sequences with their … and was demonstrated using a specific group of marine bacteria called “Vis6” that are found in North Sea algal …
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High-Quality Draft Genome Sequence of the Opitutaceae Bacterium Strain TAV1, a Symbiont of the Wood-Feeding Termite Reticulitermes flavipes
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Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance
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