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… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now …

… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating with others to develop healthier … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … the need to have a limited and time-sensitive protection of certain types of data to support their use by those generating data. The … is granted to proposal PIs, Co-PIs, and collaborators of any given proposal. Third parties (often referred to as …

… sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office …

… With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … reflecting factors such as the quality and number of datasets for human microbiome data. In other environments, … soil, having additional isolates and metagenomic datasets will strengthen future virus-host predictions. This …

… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … to the blue-lit twilight zone, to the continuous pressure of the dark abyss, 4000 m (2.5 miles) deep. Scientists have … to different oceanic depths and relying on different ways of living. The Impact Microbes help regulate the global …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … Gb (gigabasepairs — most fungi are around 50 million Mb, or megabases, in size). So, the JGI helped a consortium of … Plant Datasets …

… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … DNA (ssDNA). The discovery was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes … its large collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around the world, …

… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common … 400 root and leaf samples and helped analyze the sequencing datasets. The results from the first year showed that 10,727 …

… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … of new viruses and plasmids quickly, even in massive datasets. geNomad employs two distinct approaches to … more accurately. Additionally, because it can process large datasets, geNomad is poised to become an essential tool for …

… plant mass for conversion to sustainable, alternative biofuels and bioproducts. This study lends insights on how the … 5, 2018 in The ISME Journal , a team led by University of Oslo scientists and including researchers at the Joint Genome Institute, a DOE Office of Science User Facility, compared the genomes of two …

… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … role in soil carbon storage. Summary There are three types of fungal saprotrophs in the forest. White rot can break … generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional …