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A Mentor’s Perspective on Training the Next Generation
… Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one way or another, they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an experienced career …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and … to advance computing infrastructure and analysis. This way, JGI users — both primary, data-generating users, as …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Improving the Cacao Genome and Phytozome
… infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest … more productive cacao plants and ensure there will be cocoa for chocolate tomorrow In 2010, a draft first genome of  … for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . …
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Virus Discoveries that Keep Getting Bigger
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … on giant virus diversity, and how sequencing and bioinformatics have sped up the study of giant viruses. The … rather than an entire reference genome, to sift for snippets of giant viruses in metagenomes. This has been useful …
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Cataloging the Microbes that Manage the Health of River Systems
… States. They also provided multiple access points to the information. The team harnessed a community-science program to … microplastics that might be added to the water along the way, impacting its quality and in turn affecting … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University …
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Ancient Algae Reveal Secrets of Plant Evolution
… of how plants adapted to terrestrial life paves the way for innovations in sustainable agriculture and clean energy. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ancient algae. Essentially, even before the first plants appeared on land, these algae had a genetic toolkit for …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields … plans to pursue a STEM career? Working at JGI was a great way to gain experience in a non-academic research …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
… about the history of the Chloroflexota phylum and a new way of moving: a tail-like flagella.  …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  … Institute (JBEI). Questions and answers from the session appear below. Q&A from the Webinar: Q(uestion): Is it … involved? How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics …
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Tracing the Evolution of Shiitake Mushrooms
… 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks … decayers, Lentinula fungi access carbon previously locked away in wood, converting it into their own carbon-rich … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Marine Microbe Contains Multitudes
… help regulate the global carbon cycle — fixing, transforming, and respiring carbon. Understanding the metabolisms … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … into two main groups: two ecotypes dwell in the sunlit upper waters (above 200 m, or 656 ft), and have genes to …
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