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Conifer DBMagic: a database housing multiple de novo transcriptome assemblies for 12 diverse conifer species
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Large‐scale cultivation of the bumblebee gut microbiota reveals an underestimated bacterial species diversity capable of pathogen inhibition
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Evaluation of inducible promoter–riboswitch constructs for heterologous protein expression in the cyanobacterial species Anabaena sp. PCC 7120
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Divergent selection and climate adaptation fuel genomic differentiation between sister species of Sphagnum (peat moss).
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Diversity of Sordariales Fungi: Identification of Seven New Species of Naviculisporaceae Through Morphological Analyses and Genome Sequencing
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth … in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and their microbial communities. … use for stream health, they look at how many invertebrate species are there.  ALISON:  Those invertebrate species …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper … of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. Boasting adaptations in order … the OGG. For a long time, C-fern has served as a model for studying ferns and for teaching plant biology. It is typical …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … single cell genomics and synthetic biology, a team studying microbial populations in oxygen minimum zones …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… planet’s microbial diversity is immense, yet much of it remains unknown. For more than a decade, researchers around the … collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … procure a culture for follow up work, but also maintains various bioinformatic tools and comprehensive curated …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial … more reusable, and more insightful, for the future of studying microbial communities.   …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is … factors and mechanics of gene expression in over 400 fungi species. “Fungi are the masters of adaptation,” Wint … with helping to synthesize codon-optimized fungal genes for various biotechnological purposes,” he said. To enable such …
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