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Programs & Platform Leads
… the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA … draw from the infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant …
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … use to conduct a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to … water, and humans—around the world. By the numbers, the new approach detected inoviruses in 3,609 (6 percent) of the …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The … of drooping stalks and cracked earth are becoming common images in many regions due to more extreme weather events such … 400 root and leaf samples and helped analyze the sequencing datasets. The results from the first year showed that 10,727 …
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CalTeach
… majors interested in developing a deep understanding of STEM teaching & learning. Their coursework focuses on … local classrooms and tutoring centers. Cal Teach offers a minor in Science and Math Education, as well as a … Our interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and coding. …
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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Zhong Wang
Research in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … next-generation transcriptome de novo assembly, metagenome and metatranscriptome assembly, Hadoop based on …
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Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
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Scientific Advisory Committee
JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, and counsel on the effective management and strategic objectives of the JGI. The SAC serves … technical input on large-scale production sequencing, new sequencing technologies, and related informatics; …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … Photosynthesis appears to have a lot in common with a Rube Goldberg machine: surprising dependencies, intricate … way  Synechocystis cycles carbon.  These experiments leveraged the DOE Office of Science facilities in complementary …
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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Light-responsive expression atlas reveals the effects of light quality and intensity in Kalanchoë fedtschenkoi, a plant with crassulacean acid metabolism
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A New Method to Correct for Habitat Filtering in Microbial Correlation Networks
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