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Frederik Schulz
… in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics … lake. Microbiome . Camargo A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature …
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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. … data, and professional expertise to support the global research community in studies of complex biological and environmental systems. We optimize our service to the …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational science, creating opportunities for the global research community. The U.S. Department of Energy (DOE) … As a leader in genomics for bioenergy and environmental solutions, the JGI is well-positioned to …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… A special issue of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental and energy challenges. But not all scientists …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a … And that led me to get even more interested in how general environmental stressors, um, alter microbial biomass and …
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Scaling Up Existing Skill Sets
… Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer … to pursue a STEM career? I aspire to pursue a career in research and JGI has been the perfect experience in …
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Tanja Woyke
… After studying the mechanism of action of antifungal natural products and their derivatives … Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research was the symbiont community of a gutless oligochaete …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) marked the visit of an … of genomics, structural biology, bioimaging, and water research. The meeting involved key representatives from the … SITES Research Center (ACSI), the Centre for Water and Environmental Research (ZWU) of the University of …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … Through advances in sequencing technologies and computational approaches, more and more virus sequences are being recovered and identified from environmental samples (metagenomes). However, the quality …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for … manually curated metadata resources for organisms and environmental samples. The database aggregates relevant … entities,  further outlined in the journal  Nucleic Acids Research in November 2022.  One of GOLD’s strengths has been …
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Katherine Louie
… became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts … rich metabolite profiles from diverse biological and environmental samples in support of user science.  … in development of new, advanced mass spectrometry research products such as stable isotope probing (SIP) to …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences Laboratory (EMSL) co-hosted … User Facilities with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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