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A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … deployed a pipeline to first target cells from communities of uncultivated microbes, and then efficiently retrieve and … strides in generating genome sequences for members of the microbial world through bulk community sequencing …

The mission of the Joint Genome Institute is to serve the scientific … relevant bioenergy and environmental problems.  The mission of the National Energy Research Scientific Computing Center … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

… resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … With respect … neither the United States Government nor the University of California nor any of their employees, makes any …

… epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing … products performed at scale. Our group also performs ‘proof-of principle’ research projects to demonstrate new …

Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … discoveries toward the evolution of cellular complexity and microbial symbiosis.  This is a continuation of the previous … to a new appreciation for the extent of diversity. The phylogenetic and functional characterization of this novel …

A preview of how large-scale single cell genomics complements … of bioinformatics tools for  extracting snippets of microbial genomes directly from environmental sequence data, … But each approach demonstrates its full value at different scales. Amplicon sequencing is commonly used to assess …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … of 1 billion years of evolution in Kingdom Fungi — from phylogenetic relationships to evolution of genomic … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …

… in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … The team’s findings also illustrate what’s happening on a spatial scale. Breaking down plant matter by fungi is …

Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … 2pm Online Only: Malak Tfaily, University of Arizona: “Spatial metabolic profiling in roots reveals plant specific …

… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of America and is …