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Architecture of thermal adaptation in an Exiguobacterium sibiricum strain isolated from 3 million year old permafrost: A genome and transcriptome approach
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Halophytes and heavy metals: A multi‐omics approach to understand the role of gene and genome duplication in the abiotic stress tolerance of Cakile maritima
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Igor Grigoriev
… and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the … Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched … Miyauchi et al (2020) Large-scale genome sequencing of mycorrhizal fungi provides insights into the …
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An Automated Tool for Assessing Virus Data Quality
… fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, more and more virus sequences are being … recovered and identified from environmental samples (metagenomes). However, the quality and completeness of …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… tool.” Keynote Talk Title: CRISPRology — The Science and Applications of  Genome Editing (Virtual) Jennifer Doudna is … scales, his lab has developed an ever-growing suite of approaches, many of which profile both algal cells and … . Susan Wessler , UC Riverside Shaping up conservative genomes Keynote Talk Title: Transposable Element-Mediated …
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DAP-seq Drives Robust Mapping of Gene Regulation
… to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification Sequencing (DAP-seq), these barriers are falling. As  … maps. Together, the scale of data enabled by these approaches creates a vast resource offering researchers the …
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A Multiomic Approach to Understand How Pleurotus eryngii Transforms Non-Woody Lignocellulosic Material
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Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… that builds off their early collaborations that could help crop breeders and researchers predict how crops and model organisms may evolve.  Determining the … developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their …
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Degradation of Bunker C Fuel Oil by White-Rot Fungi in Sawdust Cultures Suggests Potential Applications in Bioremediation
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Biotech Partners Summer Intern Co-Authors NAR Paper
… program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. … his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign latitude …
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JGI-USCCN Strain Sequencing Opportunity
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