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Old can be new again: HAPPY whole genome sequencing, mapping and assembly
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Genome sequence of Nitrosopumilus adriaticus CCS1 assembled from an ammonia-oxidizing enrichment culture
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Comparative genomic analysis of thermophilic fungi reveals convergent evolutionary adaptations and gene losses
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional activities of specific microbial …
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A roadmap for equitable reuse of public microbiome data
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Cataloging the Microbes that Manage the Health of River Systems
… Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … microbial resource that provides information at multiple scales from genes to the community level. The Impact Rivers … they do—can help researchers develop predictive watershed scale models to manage river ecosystems. One application for …
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Dan Rokhsar
… the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued … which they have applied and refined in the sequencing and evolutionary analysis of over fifty plant and animal …
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Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities
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Transfer RNAs with novel cloverleaf structures
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Population structure of an Antarctic aquatic cyanobacterium
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j5 DNA Assembly Design Automation
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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