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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, … provides a foundational data set that is now available through a new  single-cell data viewer that was … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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Programs & Platform Leads
… the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … ecosystems exposed fungi to numerous new ecological niches and triggered rapid diversification of the early …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … products of photosynthesis are easy to point out. Plants, algae and cyanobacteria create the air we breathe and the … that sets this molecule apart. To better understand how the revealed structure of the protein related to its function …
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2025 NeLLi Symposium
Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the … recommendations for cultivating new Bacteria and Archaea revealed by a recent genome census . Speakers John M. …
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … Tool Inoviruses are stealth agents that can enter and exit through the cell membrane without lysing the bacterial host. … the Perception of Inovirus Diversity The results revealed inoviruses are in every major microbial …
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Viral dynamics in a high-rate algal pond reveals a burst of Phycodnaviridae diversity correlated with episodic algal mortality
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … of these systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … University in British Columbia, Canada. This is the last of the podcasts we recorded in my hotel room at SIMB, or the … between Bill Gerwick’s lab and doing research in Panama through support from the ICBG training program, which stands …
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Disclaimer
… resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … With respect … neither the United States Government nor the University of California nor any of their employees, makes any …
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Taking Stock of the Known and Unknown Microbial Space
… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … in Science Advances , researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … agriculture, biofuels and bioproducts, and medicine. Wading through 30 years of sequencing data, the team composed of …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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