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Streamlining Regulon Identification in Bacteria
… with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … of regulon identification by in vitro transcription-sequencing (RIViT-seq) to facilitate the characterization of … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions …
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Sequencing and Analysis of the Sex Determination Region of Populus trichocarpa
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How Filamentous Fungi Sense Food
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … and optimized by Ronan O’Malley, who leads the JGI’s Sequencing Technologies group. DAP-seq allowed the team to … strains generated by Grant P01 GM-068087 “Functional Analysis of a Model Filamentous Fungus” and that are …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida … cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … researchers walked students through the processes of DNA sequencing, metagenome assembly, and even an introduction to …
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Increased production of fatty acids and triglycerides in Aspergillus oryzae by enhancing expressions of fatty acid synthesis-related genes
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Genome Analysis of a Verrucomicrobial Endosymbiont With a Tiny Genome Discovered in an Antarctic Lake
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii
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A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans
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JBrowse: a dynamic web platform for genome visualization and analysis
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The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium
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John Vogel
… techniques) and utilizing these resources to understand genome organization and regulation, abiotic stress … al. 2014 Genome Diversity in Brachypodium distachyon : Deep Sequencing of Highly Diverse Inbred Lines 2014 Plant Journal … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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