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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science … viruses and phages. In these sequences are virus fragments called spacers, that indicate repelled attempts to infect … identified. The JGI researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year … a vast range of organisms and ecosystems. These kinds of data could open opportunities along multiple avenues, … community with advanced genomic capabilities, large scale data, and professional expertise while responsibly …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” … of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access novel microbial … archaeal and microeukaryote diversity cataloged and taxonomically classified to date. Under the “sequence to function’ …
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IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata.
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Taxonomic distribution of metabolic functions in bacteria associated with Trichodesmium consortia.
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential … model system focused on carbon cycling studies, rather than for food or fuel applications. The Impact Sphagnum’s impact … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different …
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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
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SoyCSN: Soybean context‐specific network analysis and prediction based on tissue‐specific transcriptome data
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
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The IMG/M data management and analysis system v.7: content updates and new features.
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Rearrangement of a Large Novel Pseudomonas aeruginosa Gene Island in Strains Isolated from a Patient Developing Ventilator-Associated Pneumonia
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