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… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … between fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, …

… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  published …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … help solve energy and environmental challenges.   The Human Genome Project began in 1990 when the U.S. Department of … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …

… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … and examined over six hundred bacterial genomes — mainly actinobacteria, as well as proteobacteria, bacteroidata, and …

… for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing …

… 2024 was a year of firsts, including the flagship internship program between … Alabama Agricultural & Mechanical University and the Joint Genome Institute. AAMU students spent two months in … their mentors and fellow interns. Inspired by the success of the UC Merced internship program, they left the JGI more …

… Open Green Genomes hits milestone with C. richardii The Science Fern … — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … framework can inform the efficient production of plant-based biofuels and bioproducts. ( Learn more about OGG in  …

… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … prove two other archaea within the Thermoproteota phylum —  Korarchaeia and  Methanomethylicia   — grow by …

… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems … The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …

… To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone … the goal is to create an entirely human-generated yeast genome. …

… Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … – Sphagnum fallax and S. magellanicum. The draft genome for  S. fallax is already available on the  JGI plant …

… directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued … by combining computational genome analysis, sequence-based genetic methods, and comparative developmental …