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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Examining the cause of high inbreeding depression: analysis of whole‐genome sequence data in 28 selfed progeny of Eucalyptus grandis
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
Learn more
Metabolomics Technology Group
Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of particular interest is …
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Ian Blaby
… strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. … view to developing a deeper understanding of sequence-based gene function. … B.Sc. (HONS) – University of Wales, … Award for Research Excellence … Education … Selected Publications … Awards and Honors …
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Denoising inferred functional association networks obtained by gene fusion analysis
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Boosting Small Molecule Production in Super “Soup”
… (BDO). To do so, the yeasts received fine-tuning of gene expression through genetic rewiring with CRISPR-Cas9 … is needed to scale up for commercial viability. “For context, commercially relevant biobased processes in cells … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … perennial grass  Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into … (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 … types, and analytical protocols that permit gene expression analysis across plants and add additional experimentally …
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Biases in genome reconstruction from metagenomic data
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Prepublication data sharing
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