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Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … EM (2014).  Stop codon reassignments in the wild.   Science 344:909-13 Nord AS, Blow MJ, Attanasio C, Akiyama JA, Holt …

… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … biofuels and bioproducts, and medicine. Wading through 30 years of sequencing data, the team composed of Wu, … five universally conserved, protein-coding marker genes on nearly 2 million genomes, including isolates, …

A preview of how large-scale single cell genomics complements metagenomics studies. The … conducting large-scale single cell genomics by collecting nearly 500 single cells from a single low diversity hot … Facility, is supported under Contract No. DE-AC02-05CH11231. This work was supported in part by a Natural Sciences …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … Food and Environment (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on …

The Integrative Genomics Building (IGB) seen above is home to … secondary users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …

JGI is in the process of shifting its operations from Walnut Creek … Sorting required multiple speedpaks – large boxes with nearly a cubic yard of capacity each – and dumpsters. The … this year, the third and final annual cleanup day filled nearly 24 speedpaks, and more than half of them were tagged …

In honor of the JGI's 25th anniversary in 2022, we have … investigated Chromosome 16, which contains about 3% of the human genome. They wanted to learn about the genes … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …

… to Tanja Woyke, who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for … genomics and metagenomics. They cited her “landmark” 2013 Nature paper , which uncovered nearly 30 major previously uncharted branches of the tree of …

In honor of the JGI's 25th anniversary in 2022, we have … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Wright AV …

WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance … optimize their code on GPUs. While the  OLCF is organizing nearly a dozen hackathons around the world in 2019, only the …

In honor of the JGI's 25th anniversary in 2022, we have … more than 200 microbial genomes that were mapped to nearly 30 major previously uncharted branches of the tree of life. …

… last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. … able to lead such an effort and Ray is that person.” For nearly all of his 15 years of his JGI/Berkeley Lab tenure, … Ray oversaw the acquisition and renovation of Building 310, adding the crowning piece of the entire 80,000 square …