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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have … that showcase our collaborations and capabilities to enable great science that will help solve energy and … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Genomic Signatures of Strain Selection and Enhancement in Bacillus atrophaeus var. globigii, a Historical Biowarfare Simulant
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to … them to increase the productivity rates for pathways of varying complexity. Rasor cautioned that further …
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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How Filamentous Fungi Sense Food
Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team … of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). And one of the tools that researchers …
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Development of PCR-based markers for the identification and detection of Lophodermella needle cast pathogens on Pinus contorta var. latifolia and P. flexilis
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Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … Fungi work in cooperation to support a forest, and species vary across Earth’s ecosystems.  Recently, in work  …
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JGI Launches Latest Strategic Plan
For the Joint Genome Institute, the end of 2018 was marked by a celebration of … “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base … phyto for ‘plant’ and planktos for ‘wanderer’). But they vary across the global ocean. Phytoplankton communities in …
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