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Microbiome Data Science: Understanding Our Microbial Planet
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BAYESIAN SPATIAL-TEMPORAL MODELING OF ECOLOGICAL ZERO-INFLATED COUNT DATA.
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Integrative analysis of multimodal mass spectrometry data in MZmine 3
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A universal language for finding mass spectrometry data patterns
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than … most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, scientists have shed … of Alaska and Norway, as well as California and Mexico. Based on the study, it would seem that once conditions …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar … outlined in  Scientific Data connects molecular features to large ecosystem-level processes for the first time. By … This research was sponsored by the U.S. Department of Energy, Office …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to … proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent of … Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … organism as a model system. “People name genes based on similarity to the Chlamy genes,” Merchant …
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Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution
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Rapid Kinetic Characterization of Glycosyl Hydrolases Based on Oxime Derivatization and Nanostructure-Initiator Mass Spectrometry (NIMS)
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and … including single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to … Plant microbiomes hold the amazing ability to influence plant … experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this …
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