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Draft genome sequence of Dethiosulfovibrio salsuginis DSM 21565T an anaerobic, slightly halophilic bacterium isolated from a Colombian saline spring
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper understanding of fundamental aspects of fern … metabolome analyses for C-fern that was able to shed some light on the mystery. They found over seven million …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … to offer a window into viral existence. Along with highlighting the viruses in a given sample, metagenomics shed …
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Extracting the Secrets of Secondary Metabolites
CRAGE-CRISPR combo helps further demystify biosynthetic gene … for growth yet essential for survival, may now be easier to characterize following a proof-of-concept study in … secondary metabolites within a lab environment, shining a light into this “biological dark matter.”  It also offers …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the … Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: Innovating … that support our scientific mission.” Strategic Plan Highlights:  Nutrient cycling theme. Advancing the JGI’s ability …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … A (2013). Fine tuning of craniofacial morphology by distant-acting enhancers. Science 342, 1241006. Visel A *, Taher L, …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for NIH … in the Milky Way, viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the … similar to how the Human Microbiome Project has shed light on how the microbes in and on humans shape our health. …
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Tanja Woyke
After studying the mechanism of action of antifungal natural products and their … Genome Institute in 2004. The main object of her research was the symbiont community of a gutless oligochaete for which … User Programs … Education … Awards and Service … Selected Publications …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity … of biodiversity, they used five universally conserved, protein-coding marker genes on nearly 2 million genomes, … of the available datasets. Efforts to recover MAGs by extracting data directly from environmental samples over the …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding Associate Director for Computational … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169T (DSM 21076T) from a sea urchin in southern China
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. Click the drop-downs to …
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