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Contrasting Modes of Mitochondrial Genome Evolution in Sister Taxa of Wood-Eating Marine Bivalves (Teredinidae and Xylophagaidae)
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Tracking the Origins of Methane-Producing Microbes
… of a novel archaeum from a hot spring that has the genetic machinery to perform hydrogenotrophic methanogenesis … study first author Bojk Berghuis. “This provided us with genetic evidence to tie together the evolutionary history of …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… tool called geNomad that identifies and classifies mobile genetic elements based upon their gene content and their genetic sequences. Roux was first author on a study …
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Analysis of the Phlebiopsis gigantea Genome, Transcriptome and Secretome Provides Insight into Its Pioneer Colonization Strategies of Wood
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… roles in creating sessions where attendees could focus on improving data collection, analysis and reporting.  … down the line,” Malmstrom said. In addition to improving data reusability, the workshop gave researchers a …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… as a group. Um, during the internship I was able to have code review sessions with a few people in my team, and we …
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Learning to Look
As their small genomes can be easily manipulated through genetic engineering, inoviruses are used for several … six families. Additionally, the team uncovered a range of genetic diversity among inoviruses with more than 3,400 … and phages to help the bacterial host resist foreign genetic elements. In some cases, Roux and his colleagues …
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Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies
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Intrinsic and Extrinsic Programming of Product Chain Length and Release Mode in Fungal Collaborating Iterative Polyketide Synthases
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Genome sequencing provides insight into the reproductive biology, nutritional mode and ploidy of the fern pathogen Mixia osmundae
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Tracing the Evolution of Shiitake Mushrooms
… enzymes these fungi use to break down wood, and compares genetic diversity between cultivated and wild shiitake … raphanica and L boryana in the Americas. Tracing these phylogenetic relationships suggests that the shiitake … Overall, pangenome analysis showed significantly more genetic diversity in wild Lentinula species compared with …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… data portal Phytozome. The combination of field data and genetic information has allowed the research team to … environments, the 4X variety was more of a specialist. The genetic variation that allows the 8X variety to be a …
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