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Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … at Lawrence Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for …

Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … focused on stable and accurate computational methods for reacting subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC …

… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … Czech Academy of Sciences first needed to build a detailed database on the denizens in the soil. While large protein … So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences …

… the microbes that play roles in the methane cycle. Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was published in the journal  Environmental Microbiome . “Before JGI was involved, I was not sure we could even complete …

The PhycoCosm data portal allows anyone to freely investigate the genes of … Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal …

… and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, … discovery pipeline and enrichment metagenomics for terrestrial protists. These approaches enable novel …

… world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   … The work (proposal: …

… worked on ranged far and wide — from implementing new data visualization tools, to using natural language processing techniques to categorize genetic information. Learn more about their work here in a series of … virtual events and technology enabled a fruitful experience for mentors and students alike. Tools like Slack, Google …