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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … build proteins. What Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of … Last summer, Wint hosted a virtual four-day data carpentry workshop for the incoming 2021 JGI-UC Merced interns to help …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… to the project. Also my area of expertise over the past couple years is a little bit different from what I did … was how to use Python, um, from the week long Python workshop. And I’m excited to take that with me, along with …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into … For Guillaume Borrel and Simonetta Gribaldo of the Institut Pasteur in France, the importance of methanogenesis and the … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained …
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A survey of computational approaches for characterizing microbial interactions in microbial mats
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Special Initiatives & Programs
… breakthroughs in basic science, and is exploring microbial-based synthesis of fuels beyond ethanol. … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …
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Trent Northen
… Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … Wang G et al. Chassis-Independent Recombinase-Assisted Genome Engineering Enables Rapid Activation of Biosynthetic … of the Division in 2015-2016. Dr. Northen regularly chairs workshops, organizes conference sessions, and serves on …
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JGI@25: Strengthening Soybean
… and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … the first legume species with a published complete draft genome sequence. At the time, the vital global source of … soybean.”  Upon its initial release in 2009, the soybean genome sequence immediately spurred further research and …
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The microbial ecology of permafrost
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Microbial Diversity for Biotechnology
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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Degradation Reduces Microbial Richness and Alters Microbial Functions in an Australian Peatland
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … and small molecules produced by the trees and associated microbial communities. This revealed key metabolic pathways … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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