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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Massie S. Ballon
S. Ballon is the Communications and Outreach Manager at the JGI. Prior to this role, she served as the primary … from Wesleyan University, and a graduate certificate in science communication from UC Santa Cruz. She is one of the Biosciences Area representatives to Berkeley Lab’s Inclusion, …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… when it comes to breaking down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria and fungi have genes that can break … proteins in the samples were then isolated and sequenced by scientists at the Environmental Molecular Sciences …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers … about their ability to adapt to changing environments, scientists have turned their attention to the pangenomes of … of the  Marchantia pangenome, scientists developed a resource that associates plant’s genetic variants with specific …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… (SFA²F) meeting brings together established and emerging scientists from academia, industry, and government … talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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Nick Everson
Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human Resources, Facilities, IT, Shipping and Receiving, Lab … Haas School of Business Served as a reviewer for DOE’s Science & Operations Peer Review of the Center for …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. Most species are … with sufficient resolution to analyze their structure. Scientists found both a gene likely important for sex … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades evokes images of fanboats … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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New Research Sheds Light on Diversity in the Deep Sea
… deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are ocean-floor openings in the … the makeup and functioning of a given microbial community. Scientists with the U.S. Department of Energy Joint Genome … (IMG/M) portal. The study,  published in the  Microbiome journal, broadens our understanding of the unique …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s …
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CSP Functional Genomics
… function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance … synthetic biology review process .  … Proposers are encouraged to review the JGI’s sample requirements . Samples … questions prior to proposal submission.   … Additional Resources …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed significant … increased nutrient uptake and decreased cell death.  Scientists then extracted RNA to analyze gene expression, to …
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