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Help from Citrus’ Bitter, Hardier Cousin
… citrus, trifoliate orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now … a team of researchers sequenced  P. trifoliata ’s genome. Scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Discovery of Novel Plant Interaction Determinants from the Genomes of 163 Root Nodule Bacteria
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2024 Progress Report
Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead … complex biological and environmental systems. We optimize our service to the community through responsibly managing … progress calls, outreach activities and hosting visiting scientists at all stages of their careers. Our staff have …
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Incorporating Genomics and Bioinformatics across the Life Sciences Curriculum
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Strain Engineering
The focus of this group, in recent years, has been to bring … The developed strains represent an additional phase of user-accessible project types, in which DNA-based … integrated into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium … his postdoctoral studies at the Carnegie Institution for Science where he studied the molecular basis of a plant …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
The Department of Energy's Computational Science Graduate Fellowship (DOE … Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational …
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Supercharging SIP in the Fungal Hyphosphere
… helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a … is a long and laborious process — as well as a key way scientists study microorganisms. Because microorganisms live … HT-SIP is a capability available to request through  the JGI proposal calls . … Work at Lawrence Livermore National …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to the JGI User Executive … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been … for three additional positions on the UEC. Thirty-four JGI users were nominated, representing a breadth of …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… community involved in a bioremediation effort. The Science In 1999, the Environmental Protection Agency … populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the PCE in the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Dan Rokhsar
… 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the …
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Specialized Plant Growth Chamber Designs to Study Complex Rhizosphere Interactions
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