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The Integrated Microbial Genome Resource of Analysis
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial … is the interim director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. …
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Trent Northen
… has had leadership roles within large DOE-funded research programs using mass spectrometry for energy and … ecosystems (EcoFABs). … Trent Northen is the Metabolomics Science Program Head at the JGI. Click to learn more about … (16), 567–571 (2019) doi: 10.1038/s41592-019-0465-0. Couradeau E et al. Probing the active fraction of soil …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful analysis of microbiome data that has changed our understanding of the microbiome and the microbial …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… between some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … supported in part by the Allen Distinguished Investigator Program, through The Paul G. Allen Frontiers Group, the …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers … plant lineages makes it ideal for comparative genomics studies, offering insight into genes critical for … of the  Marchantia pangenome, scientists developed a resource that associates plant’s genetic variants with specific …
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Training the Next Generation of Talent
… of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user facility, Keedrian Olmstead was back on campus … a part of the students’ thesis,” she says. “Second, we want our students to gain the opportunity to see what research is … that would allow users to simultaneously run several programs for RNA-Seq assembly to determine which is best for …
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Informatics Advisory Committee
… management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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How Filamentous Fungi Sense Food
… networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of … importantly, when faced with a veritable buffet of carbon sources, these fungi detect which complex chains are … work was enabled in part through JGI’s Community Science Program through a proposal akin to the Encyclopedia of DNA …
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JGI announces final round of 2022 Functional Genomics awardees
… the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that … deadline is July 31. You can learn more about our Community Science Program here .  …
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm microbial diversity is wilder than ever. Imagine researchers … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … diversity has doubled, but in reality it could be three or four or five or tenfold more out there.” Digging Further into …
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