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JGI announces second round of 2023 New Investigator awardees
Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any …
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Synthetic Biology Informatics Group
… maintain software that support the JGI’s Synthetic Biology Program .  Representative software includes: gRNA-SeqRET , …
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Simon Roux
… knowledge of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established and … with long standing virus-host interactions. The ISME Journal 15, 1569–1584. Nayfach et al., 2020. CheckV assesses …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  … Bioproducts Innovation (CABBI) , a Department of Energy (DOE) Bioenergy Research Center, along with researchers from … to novel traits.  M. sinensis is a tetraploid, with four sets of chromosomes; the study showed that these sets …
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10 From JGI on the 2019 Highly Cited Researchers List
Animal Science and Molecular Biology & Genetics categories Microbial Systems research group lead and User Programs … , Biology & Biochemistry category Some highlights from projects each of these researchers were involved in that … for an uncultivated virus genome, including the source, methods of identification of the virus genome, and …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science … Deputy for Science Programs. Click to learn more about our seven science program — their areas of focus, major …
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Forming Scientific Connections and Building Community
… experiences. This year the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … and also made new friends while working on their summer projects. Watch the short video here to see what they had to … who were able to give me some guidance in my academic journey.” Mentors: Deze Kong & Yasuo Yoshikuni Project: “ …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic …
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Work With the JGI! Tips for a Winning CSP Proposal
The JGI’s Community Science Program gives researchers access to all kinds of sequencing, … stage, anywhere in the world, for free. We accept new projects related to energy and the environment several times … manager Miranda Harmon-Smith, who helps shepherd CSP projects along. …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using …
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Accessibility/Section 508 Statement
… or concerns related to the accessibility of this website to DOE Section 508 Coordinator mailbox.   For more information about Section 508, please visit the DOE Section 508 website. …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts to expand the metabolomics … Rocha UN, Shi S, et al. Dynamic root exudate chemistry and microbial substrate preferences drive patterns in …
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