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Expanding Virophage Diversity
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … were considered to be complete genomes, and their discovery has extended the possible virophage genome size range … Paez-Espino  discussed an early version of the paper at the 2018 Viral EcoGenomics & Applications (VEGA) Symposium. The …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… transcriptomics studies to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … 2021, which aims in part to build off of this work. Former JGI postdoctoral scholar Margot Bezrutczyk collaborated …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… transcriptomics studies to date. This paper  is the cover article for the April 2024 issue  of  Nature Plants .  … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … 2021, which aims in part to build off of this work. Former JGI postdoctoral scholar Margot Bezrutczyk collaborated …
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Natural Prodcast Episode 9: Roger Linington
… let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … Gerwick as part of the International Biodiversity Drug Discovery consortium doing natural products isolation/structure … structures is obviously very valuable. From my perspective, JGI has a large database of biosynthetic gene clusters and …
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“A STEM career is in reach and accessible”
Notes from the Summer 2018 Biotech Partners Interns from Antioch High School. … higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … her thoughts about the experience below. In the summer of 2018, Jonathan Benskin was preparing to teach a second year … from the enormous data set on the IMG portal. The class discovered Actinobacteria, Acidobacteria, and Proteobacteria to …
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Effects of Polar Light Cycle on Microbial Food Web
… studies focused on the Southern Ocean have found that in winter months, when sunlight is nonexistent, the bacteria … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … Science Program. For most months each year, Ace Lake is covered in thick ice, with a combination of marine and …
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a … JGI-developed genetic engineering technique CRAGE lands the cover of ACS Synthetic Biology. (Wayne Keefe/Berkeley Lab) … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in …
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Dan Rokhsar
… over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, Computational Biology, …
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