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Hot springs viruses at Yellowstone National Park have ancient origins and are adapted to thermophilic hosts
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Diversity and function of methyl-coenzyme M reductase-encoding archaea in Yellowstone hot springs revealed by metagenomics and mesocosm experiments
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Novel hot spring Thermoproteota support vertical inheritance of ammonia oxidation and carbon fixation in Nitrososphaeria
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … started by collecting samples from Yellowstone’s hot springs, an extreme environment with low genetic diversity … of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for …
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The Power of One, Amplified
… nearly 500 single cells from a single low diversity hot spring sediment sample. Their work showed that single cell … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … was performed by Danielle Goudeau and Rex Malmstrom of the JGI’s Microscale Applications group . Cells were randomly …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of … that we have a sister portal PhycoCosm ( https://phycocosm.jgi.doe.gov ) to explore algae and other eukaryotes, where … search for genes/proteins by their commonly used names in publications? e.g. erg-1 (instead of the Gene ID etc., which …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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CSP Functional Genomics
… function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at any time using a simple web-based form and are …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. The sequences … then a postdoctoral fellow with Doudna and longtime JGI collaborator Jill Banfield, also at UC Berkeley. …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … and Genomics of Brachypodium. 2016 Vogel, J.P. Ed., Springer, Switzerland. ISBN: 978-3-319-26942-9 Gordon, et. … et. al. 2017 Sequencing and functional validation of the JGI Brachypodium distachyon T-DNA collection. Plant Journal …
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Metagenomes and Metagenome-Assembled Genomes from Substrate-Amended Hot Spring Sediment Incubations from Yellowstone National Park
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High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1T Isolated from Great Boiling Spring, Nevada
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