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A transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains.
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GENESPACE tracks regions of interest and gene copy number variation across multiple genomes
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and … that green millet was introduced into the United States multiple times from Eurasia. The team also identified a gene …
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iPHoP: A Matchmaker for Phages and their Hosts
… be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like … freely available online ). It combines and evaluates multiple predictions to reliably match viruses with their … draws on the strengths of multiple virus-host prediction methods. In building this program,  described in Plos …
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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization
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Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence
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PolyCRACKER, a robust method for the unsupervised partitioning of polyploid subgenomes by signatures of repetitive DNA evolution
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An Improved Method of RNA Isolation from Loblolly Pine (P. taeda L.) and Other Conifer Species
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… plant species have adapted to their local environments; for example, crop and ornamental seeds sold for the upper … of clonally propagated plants to address these questions.” Multiple collection methods were applied to gather the diversity of switchgrass …
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Metagenomics uncovers gaps in amplicon-based detection of microbial diversity
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Constraining the oxygen requirements for modern microbial eukaryote diversity
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Fungal Friends or Foes in Plant Roots
… determine if these fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can … They play key roles in maintaining the plant’s health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. …
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