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The Fungi That Survive In Antarctica
… day help other organisms survive hotter, drier climates. So University of Tuscia researchers Laura Selbmann and Claudia Coleine are …
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Alabama A&M Interns Access An Abundance of Knowledge
In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an internship program to bring students … mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … a senior biology major and currently attending Alabama A&M University, and I am an aspiring pediatric orthodontist. …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… school scientists. The Florida Everglades evokes images of fanboats skimming over swamps, while alligators peer … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), embarked on a … was happy to offer advice but declined to offer actual scientific help,” said Jonathan Benskin, who teaches the A-Level …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the …
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Enlarging Windows into Understanding Gene Functions
… in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). And one of the … Unique Capability DAP-seq allows researchers to identify all the sites where transcription factors bind quickly …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and the  DOE …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) hosted a pitch … summer research collaborations through the U.S. Department of Energy (DOE)’s Visiting Faculty Program (VFP) . The VFP …
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The Surprising Structure of a Shrub Willow Sex Chromosome
A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, … specimen. Stephen DiFazio, plant biologist at West Virginia University (WVU), led the study’s international team, which … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic biology, Robert Evans and Jan-Fang Cheng in the …
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PhycoCosm Tutorial
… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative … by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, Alan Kuo, Sara …
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SIPs with Standards
SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few different ways they're working to … more reusable, and more insightful, for the future of studying microbial communities.   …
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, the design of new experimental … Virus Genome (MIUViG). Nature Biotechnology 37, 29–37. Berg et al., 2021. Host population diversity as a …
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