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Fishing for Novel Cellulose Degraders
… by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and mass spectrometry-based enzyme activity assay. The work was  reported in  The ISME Journal . While the screen …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … focused on tool development. Specifically, the goal of this work is to develop tools, curated databases, and streamlined …
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A Natural Mechanism Can Turbocharge Viral Evolution
… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … known, throws open the doors to characterizing how DGRs work at the molecular level. Scientists might then harness …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any …
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Evolution of a Fungal Gene Expression Regulator
… in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like … and cataloging them in JGI’s fungal portal MycoCosm. … The work conducted by the US Department of Energy Joint Genome …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … and Cell Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative … user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… organisms share space at cellular scale: fungi stretch a network of tendrils called arbuscules into a plant’s root … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Partners
The JGI leverages its existing partnerships and develops others providing complementary … RNA extractions to support plant and other efforts. The JGI works closely with DOE computational facilities (e.g., the …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a … that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … more efficiently than one strain could on its own.  In work published in  Synthetic Biology , the team used CRAGE …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … training in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of Medicine and her graduate work in microbial oceanography at Scripps Institution of …
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The Power of One, Amplified
… a single low diversity hot spring sediment sample. Their work showed that single cell genomics can add significant … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … together with their unicellular hosts,” Schulz added. The work also used resources of the  National Energy Research …
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