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ActinoBase: tools and protocols for researchers working on Streptomyces and other filamentous actinobacteria
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, … is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the … for a proposal, we encourage you to contact the relevant JGI  Science Program leads to discuss available options. …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente … had summer 2018 internships in Walnut Creek. The students’ research culminated in presentations on their work delivered …
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A Complex Confection Decoded: Sugarcane Reference Genome
… major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane … production. A reference genome for the sugarcane cultivar R570 has been  published in  Nature by an international … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop …
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Forming Scientific Connections and Building Community
… a DOE Office of Science User Facility, hosted three undergraduates and seven graduate students from UC Merced through their long standing … JGI brings and being able to be a part of groundbreaking research is very sentimental to me.” Mentors: Crysten …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… On July 30, UC Merced students and their JGI mentors toasted to the end of a nine-week virtual … summer internship program, which began in 2014, pairs undergraduate and graduate students from UC Merced with at least …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… (DOE) Office of Science’s Biological and Environmental Research program because of its relevance to understanding … Internship Program. In 2023, Shayna Bennett, a UC Merced graduate student in Carolin Frank’s lab , worked on an … to a new environment. She is currently working on her thesis to characterize the microbiome phyllosphere of black …
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Phototrophic Co-cultures From Extreme Environments: Community Structure and Potential Value for Fundamental and Applied Research
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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens … development while curating reusable microbiome data. Undergraduate educators are partnering with the JGI and KBase to … modularized scientific progress – Research Question and Hypothesis Development (Module 1), Experimental Design and …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … National Laboratory (Berkeley Lab) and the Laboratory for Research in Complex Systems (LRC) in Menlo Park, Calif. In … Volland said. “In terms of metabolism, it does chemosynthesis, which is a process analogous to photosynthesis for …
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ATGC: a database of orthologous genes from closely related prokaryotic genomes and a research platform for microevolution of prokaryotes
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  … a funding organization. Rather, it makes its sequencing, synthesis, metabolomics and data analyses capabilities … to academic, government agency, non-profit, and industry researchers worldwide.  Q:  To what extent is natural soil a …
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