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Landscape topography structures the soil microbiome in arctic polygonal tundra
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Rainforest-to-pasture conversion stimulates soil methanogenesis across the Brazilian Amazon
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Phylogenetic and metagenomic analysis of Verrucomicrobia in former  agricultural grassland soil
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Soil microbiome feedbacks during disturbance-driven forest ecosystem conversion
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Soil metabolomics: Deciphering underground metabolic webs in terrestrial ecosystems
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Microbial responses to long-term warming differ across soil microenvironments
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Metatranscriptomes of California grassland soil microbial communities in response to rewetting.
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Long-Term Persistence of Three Microbial Wildfire Biomarkers in Forest Soils
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and 314 metabolomic profiles — …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the story behind that giant assembly from Lake … In this episode: the software evolution that made metagenome assemblies like this possible. …
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Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics
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Methane-derived carbon flows into host–virus networks at different trophic levels in soil
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