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DNA affinity purification sequencing and transcriptional profiling reveal new aspects of nitrogen regulation in a filamentous fungus
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Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions
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Len Pennacchio
… has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He … DOE Joint Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… of viruses in the same drop—the vast majority not harmful to humans could be even larger. Viruses infect bacteria, … and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) uncovered a …
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Axel Visel
… at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max Planck Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in … organisms. During his postdoctoral training at Lawrence Berkeley National Laboratory, he developed and applied novel …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved … Genomics and Systems Biology Division of Lawrence Berkeley National Laboratory (Berkeley Lab). He completed … found that these enzymes have evolved distinctly from both core and specialized enzymes. Even during …
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Genome evolution in the allotetraploid frog Xenopus laevis
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River microbiomes from around the world: Kelly Wrighton
Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the … world’s river microbiomes. And they’re using team science to do it.   …
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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow
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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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Sequence-based bioprospecting of myo-inositol oxygenase (Miox) reveals new homologues that increase glucaric acid production in Saccharomyces cerevisiae
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JGI Scientists Pen Genome Watch Articles
Reviews Microbiology column last year — and there’s more to come in 2020. Researchers at the U.S. Department of … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in … leads the  Microbial Program at the JGI, received a message from Andrea Du Toit, senior editor for  Nature Reviews …
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