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The Experiment Data Depot: A Web-Based Software Tool for Biological Experimental Data Storage, Sharing, and Visualization
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Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
Júnia Schultz is currently a postdoctoral fellow at the Biological and Environmental Sciences and Engineering Division at King Abdullah University of Science and Technology …
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Axel Visel
… the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and … novel tools for large-scale in situ gene expression analysis in multicellular organisms. During his postdoctoral … is the JGI's Deputy for Science Programs. Click to learn more about our seven science program — their areas of focus, …
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Network Modeling of Complex Data Sets
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Dealing with Drought: Uncovering Sorghum’s Secrets
… earth are becoming common images in many regions due to more extreme weather events such as heat waves, droughts and … by a growing human population and increasing demand for agricultural products.  Sorghum bicolor (L.) Moench is … 400 root and leaf samples and helped analyze the sequencing datasets. The results from the first year showed that 10,727 …
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Picking Up Threads of Cotton Genomics
… , both faculty investigators at the HudsonAlpha Institute for Biotechnology. “The goal has been for all this new … D are available for comparative analysis on JGI’s plant data portal  Phytozome , which is a community repository and … some of the most pressing challenges of our time. For more information, please visit  …
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Understanding Wildfire Recovery, Starting in Soil
The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, … of plants and animals, but with climate change driving more extreme wildfires, more and more forests are under … — mainly actinobacteria, as well as proteobacteria, bacteroidata, and patescibacteria. A major strength of this kind of …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … how these hosts and hitchhikers coexist is key for understanding their impact on wider ecosystems, but … nutrient cycling across the planet. Summary To understand more about how archaeal hosts and hitchhikers coexist, …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… viruses (NCLDV) supergroup. The expansion of the diversity for large and giant viruses offered the researchers insights … other nutrient cycles. “This is the first study to take a more global look at giant viruses by capturing genomes of … team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, …
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Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae
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A synthesis of bacterial and archaeal phenotypic trait data
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